BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D06LP1|AL425684
(758 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1387 1495 0.0
>3x_Contig1387
Length = 7827
Score = 1495 bits (753), Expect = 0.0
Identities = 755/757 (99%)
Strand = Plus / Plus
Query: 2 cgtaattcagcatattttacagcatggaactgaagatacgagcagtcacataggaatgag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3827 cgtaattcagcatattttacagcatggaactgaagatacgagcagtcacataggaatgag 3886
Query: 62 taaacaaaatatcatcgatatcattcgtaagaatgttgttgaatattcaaaacacaaatt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3887 taaacaaaatatcatcgatatcattcgtaagaatgttgttgaatattcaaaacacaaatt 3946
Query: 122 tgcctccaatgttgttgaaaagtcagtagtttacggatccaaaaaccagataagacagat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3947 tgcctccaatgttgttgaaaagtcagtagtttacggatccaaaaaccagataagacagat 4006
Query: 182 tttggatcaaattctaccaagagacgaagagcacgccgctgatttggaagataatgcacc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4007 tttggatcaaattctaccaagagacgaagagcacgccgctgatttggaagataatgcacc 4066
Query: 242 attgattctaatgatgcgggatcaatacgcgaactacgttgttcaaaagctcgtgggtgt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4067 attgattctaatgatgcgggatcaatacgcgaactacgttgttcaaaagctcgtgggtgt 4126
Query: 302 cgcaactggtgaagatgagaggttgattgttatttccatcagatcctatttggataaatc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4127 cgcaactggtgaagatgagaggttgattgttatttccatcagatcctatttggataaatc 4186
Query: 362 caataaaaataacactttgggtaacaggcatttggctagtgttgaaaagttagcaacttt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4187 caataaaaataacactttgggtaacaggcatttggctagtgttgaaaagttagcaacttt 4246
Query: 422 ggtggaaaavattcagatatagatgtatgtcagcctcaacttgggaaagcaagacaaaaa 481
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4247 ggtggaaaaaattcagatatagatgtatgtcagcctcaacttgggaaagcaagacaaaaa 4306
Query: 482 aaattgttctgcctcgaatatttgcatttgataaccacgctttctttccctaataactgg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4307 aaattgttctgcctcgaatatttgcatttgataaccacgctttctttccctaataactgg 4366
Query: 542 ttcactttctaaatcattctattgatgaagattgccatttcttacgttttgtatccccgt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4367 ttcactttctaaatcattctattgatgaagattgccatttcttacgttttgtatccccgt 4426
Query: 602 gatatctctcacgaagatcttaatatcttctaavatctgttgttgagaacagattactac 661
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4427 gatatctctcacgaagatcttaatatcttctaaaatctgttgttgagaacagattactac 4486
Query: 662 ctaataaattaatatcctttaaatgtacatattgtttatcatcatcctgtttataataca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4487 ctaataaattaatatcctttaaatgtacatattgtttatcatcatcctgtttataataca 4546
Query: 722 tgcaaatatttatctctgctataagttttaatgacca 758
|||||||||||||||||||||||||||||||||||||
Sbjct: 4547 tgcaaatatttatctctgctataagttttaatgacca 4583
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7078
Number of Sequences: 1807
Number of extensions: 7078
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 758
length of database: 10,358,551
effective HSP length: 16
effective length of query: 742
effective length of database: 10,329,639
effective search space: 7664592138
effective search space used: 7664592138
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)